It sounds like your concern is transportation between POFQ & POR.
Buses to MK do not stop at both. In the morning, I think all of the parks have separate buses. After 11 a.m., buses to AK stop at POFQ, then at POR. I'm not sure about the Epcot & DHS buses after 11. Remember that park buses only load guests while the park is open.
The DTD bus makes all stops at POR, and then stops at POFQ. It runs from about 8:30 a.m. until after midnight.
You can also ride the boat between the 2 sides of the resort, in either direction. The boats run from 10 a.m. until about 10:30 p.m., and they accommodate wheelchairs.