OP ~
I saw all those pretty colors in your OP and my eyes went cross!

So, I thought I may as well just ask directly; I apologize in advance if this has already been answered:
We've booked a package for the F&WF which includes a 2-day basic pass and Deluxe Dining. However, we also happen to have paper 3-day PH passes. Since we will only have 4 full days in Orlando [one day will be spent at 'the other theme park'

] we only need 3 days worth of park passes. So, we would [obviously] rather use the PH ones, since, a) they are 3 days and, b) we get to park hop. I called WDW and was told that I should not link the paper passes [on MyDisneyExperience] with our package because the 2-day passes would automatically be activated when we use our bands. If we use our paper ones, those will be used and the 2-day passes will not be activated as long as we don't use those to enter a park. (BTW, we could also transfer our paper passes onto another band if we so choose.) Here is where my dilemma comes up. How do I get FP+ for the 3-day ones?

If I do reserve FP's [with the existing ones on MyDisneyExperience] will they be void if I try to use them on those days since they aren't associated with the other passes?
TIA!