I purposely booked a flight with the transfer in the States so I would be able to go through customs before I even leave Halifax. Last year, I transfered in Toronto, Canada and our flight was late and I had to literally run with three suitcases and a six year old to go through customs. I tried avoiding that this year by booking my transfer through New York instead. Little did I know....
I hope no one got the wrong impression..I said I was leaving on a Friday morning flight BUT I did not mean this Friday. My flight doesn't leave until Nov. 30th. So, I have some time to figure this out. Well, at least until September 5, when American Airlines seat sale ends and the airline said I would then have to pay full price to transfer flights after that date.
Sorry, if there was any confusion, I just wanted people's advice who would know New York and/or the way flights are handled. Thanks to everyone who is helping me find a solution.
I'm still waiting for the Manager to call me back.
The TA says hes a hard guy to get ahold of. SURE! 
I hope no one got the wrong impression..I said I was leaving on a Friday morning flight BUT I did not mean this Friday. My flight doesn't leave until Nov. 30th. So, I have some time to figure this out. Well, at least until September 5, when American Airlines seat sale ends and the airline said I would then have to pay full price to transfer flights after that date.
Sorry, if there was any confusion, I just wanted people's advice who would know New York and/or the way flights are handled. Thanks to everyone who is helping me find a solution.
I'm still waiting for the Manager to call me back.
The TA says hes a hard guy to get ahold of. SURE! 
And I agree...that's the OP's best bet to get it resolved.
