My advice is to read the FAQ threads for both resorts here, and check out Andre Willey's portorleans.org site. Look at the maps and the pictures and decide which resort is more appealing to you. Last month, I stayed at POFQ for the first time and loved it. I looked at both but chose POFQ for the smaller, more compact size, and because I liked the looks/style of it best. I am not a "rustic, outdoorsy" person, so what a lot of people LOVE about the Alligator Bayou section of POR didn't appeal to me. The mansions look huge, and POR in general is much larger and more sprawling than POFQ.
I'm not a pool person, so that wasn't a factor, and I only used the food court for breakfast, so that wasn't really an issue, either. My experience with bus service at POFQ was fine, but I don't generally have an issue with the buses. I don't think you can go too far wrong with either, but the more time you spend researching and looking at photos and video, the more you'll find you have a preference for one or the other.